"The issue I'm having is it does not label the mob so it appears at the top of the Spawn List."

On the map window, in the spawn list, click on "Name" and it will sort the spawns alphabetically by name with [C], [H] and [R] at the top of the list (because '[' will come before 'A']).




"I manually entered the mobs for Laurion's Inn and got it to work the way I wanted to, but I could not figure a way to automate it for the hundreds of zones."

I use it for hunter as well but when I go into a zone, I edit the zone file and add the hunter mobs for each zone under the hunter label. When I kill one, I move the name under the caution label so it still appears at the top as a special mob but I know if I've already killed it or not.